Several evaluation metrics are provided, such as mean absolute deviance (MAD), concordance correlation coefficient (CCC), Pearson correlation coefficient (Pearson), given true cell type proportions,

evaluate(
est.prop,
true.prop
)

Arguments

est.prop

estimated cell type proportions

true.prop

true cell type proportions

Value

cell.type.eva

cell-type level evaluations based on MAD, CCC, and Pearson.

all.eva

Overall evaluations based on averaged MAD, CCC, and Pearson.